PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10019543
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 475aa    MW: 53336.1 Da    PI: 6.8621
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10019543genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42e-10174214444
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                   k+ rr+++NReAAr+sR+RKka++++Le    +L++  ++
  Lus10019543 174 AKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQE 214
                  6999*************************876666665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-6171242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082173217IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7174214IPR004827Basic-leucine zipper domain
CDDcd147084.37E-22175227No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-9175219No hitNo description
SuperFamilySSF579594.01E-7177218No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
PfamPF141444.8E-31250325IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MVSNGMGKTH HDPYALFNGI NPPSTTFIHS DGPDFDFGEL EEAILLQGGV KIRNDERPLR  60
EGADAVAAAA GKTLEIMFPS WPMRFQHAYT PTILPEQQGS SRSGEESTDD DSGSAVNTIT  120
VKTDQYHHHQ NQGKRSAPPA SSFSDHFQQH HQMEISAAGN DQGKVTPPEK SLDAKALRRL  180
AQNREAARKS RLRKKAYVQQ LESSRIKLSQ LEQELHRARQ QGVFIGGNLS SAAAMFDAEY  240
GRWVEEDLRQ MSELQSALHS QLSESELREV VERYVCHYDE IFRLKGATAK SDVFHLITGM  300
WCTSAERCFH WMGGFRPSDL IKMLISQLDP LTEQQVMGIY SLQHSTQQAE EALTQGLEQL  360
QHSLVGTIAA PADWMQQMAI ALAKVSNLQS FLRQADNLRQ QTIHQLRRIL TVRQAARCFL  420
VIGEYYGRLR ALSSLWASRP REVVISEEKS CQMITSDVQM VQLPPPQHSH FASF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077857.10.0PREDICTED: transcription factor TGA2 isoform X1
SwissprotO241601e-121TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A067KMV40.0A0A067KMV4_JATCU; Uncharacterized protein
STRINGPOPTR_0009s16590.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45553357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-178bZIP family protein